Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS39495.1Pfam:pfam06319 Protein of unknown function (DUF1052). (145 aa)    
Predicted Functional Partners:
AMS44238.1
Hypothetical protein.
  
     0.678
AMS42778.1
Pfam:pfam06170 Protein of unknown function (DUF983).
  
   
 0.667
AMS44239.1
Helicase; Pfam:pfam08494 DEAD/H associated.
  
     0.636
AMS43741.1
Pfam:pfam06170 Protein of unknown function (DUF983).
  
   
 0.632
AMS39886.1
Pfam:pfam10984 Protein of unknown function (DUF2794).
  
     0.628
AMS42762.1
Lysophospholipase; Pfam:pfam07370 Protein of unknown function (DUF1489).
  
     0.604
AMS39497.1
ATPase; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.595
AMS39827.1
Hypothetical protein; Pfam:pfam00817 impB/mucB/samB family.
  
     0.581
AMS44143.1
Pfam:pfam11164 Protein of unknown function (DUF2948).
  
     0.522
AMS42821.1
Hypothetical protein; Pfam:pfam07345 Domain of unknown function (DUF1476).
  
     0.510
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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