STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39549.1Sugar phosphate isomerase; Pfam:pfam01261 Xylose isomerase-like TIM barrel. (362 aa)    
Predicted Functional Partners:
AMS39550.1
Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily.
       0.718
AMS39551.1
Hypothetical protein; Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily.
       0.718
AMS39552.1
Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
       0.718
AMS39553.1
Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
       0.718
AMS39554.1
Oligopeptide ABC transporter, periplasmic oligopep tide-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
       0.703
AMS41075.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Pfam:pfam02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Belongs to the TPP enzyme family.
  
  
 0.593
AMS42659.1
Hypothetical protein; Pfam:pfam07702 UTRA domain.
 
  
 0.584
AMS41078.1
5-deoxyglucuronate isomerase; Pfam:pfam04962 KduI/IolB family.
  
  
 0.544
AMS39421.1
GntR family transcriptional regulator; Pfam:pfam07702 UTRA domain.
  
  
 0.529
AMS39415.1
Oxidoreductase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
 
  
 0.523
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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