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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39553.1Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. (347 aa)    
Predicted Functional Partners:
AMS43838.1
Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
  0.964
AMS44264.1
Peptide ABC transporter; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
  0.963
AMS39552.1
Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
    0.959
AMS39554.1
Oligopeptide ABC transporter, periplasmic oligopep tide-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
 
   0.937
AMS41094.1
Peptide ABC transporter substrate-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
 
  0.924
AMS43839.1
Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
  
  
 
0.918
AMS44265.1
Peptide ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
  
  
 
0.912
AMS44266.1
Peptide ABC transporter substrate-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
 
  0.911
AMS44263.1
Peptide ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
  0.908
gsiA_36
Pfam:pfam00005 ABC transporter.
 
 
 0.889
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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