Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS39563.1Hypothetical protein; Pfam:pfam00067 Cytochrome P450. (418 aa)    
Predicted Functional Partners:
AMS43008.1
Vanillate O-demethylase oxidoreductase; Pfam:pfam00111 2Fe-2S iron-sulfur cluster binding domain.
 0.906
AMS44169.1
Dioxygenase subunit beta; Pfam:pfam00175 Oxidoreductase NAD-binding domain.
 0.880
AMS39562.1
Hypothetical protein.
 
 0.864
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
    
 0.823
AMS40610.1
Oxidoreductase; Pfam:pfam00111 2Fe-2S iron-sulfur cluster binding domain.
 0.790
AMS41379.1
Pfam:pfam03033 Glycosyltransferase family 28 N-terminal domain.
  
 
 0.728
AMS39561.1
Glyoxalase; Pfam:pfam00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
     
 0.588
AMS43288.1
Cysteine desulfurase; Pfam:pfam12796 Ankyrin repeats (3 copies).
  
 0.575
AMS40580.1
Hypothetical protein; Pfam:pfam00175 Oxidoreductase NAD-binding domain.
 
 0.558
AMS44253.1
Pfam:pfam00487 Fatty acid desaturase.
 
 0.543
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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