Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AMS39569.1Pfam:pfam01047 MarR family. (184 aa)    
Predicted Functional Partners:
AMS39570.1
Cyclase; Pfam:pfam04199 Putative cyclase.
 
    0.745
AMS39567.1
Indolepyruvate oxidoreductase subunit IorB II; Pfam:pfam01558 Pyruvate ferredoxin/flavodoxin oxidoreductase.
 
  
 0.683
AMS39566.1
Indolepyruvate oxidoreductase subunit IorA; Pfam:pfam02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain.
 
     0.632
slyA_7
Hypothetical protein; Pfam:pfam12802 MarR family.
  
     0.468
AMS40937.1
AraC family transcriptional regulator; Pfam:pfam14525 AraC-binding-like domain.
  
  
 0.427
AMS43882.1
Cupin 2, conserved barrel domain protein; Pfam:pfam07883 Cupin domain.
  
    0.422
AMS43130.1
Pfam:pfam01047 MarR family.
  
     0.411
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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