Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMS39027.1 | AMS39589.1 | AA2016_0084 | AA2016_0650 | Mannose-1-phosphate guanyltransferase; Pfam:pfam01061 ABC-2 type transporter. | Pfam:pfam00005 ABC transporter. | 0.647 |
AMS39101.1 | AMS39589.1 | AA2016_0159 | AA2016_0650 | Spermidine/putrescine ABC transporter, permease protein. | Pfam:pfam00005 ABC transporter. | 0.633 |
AMS39101.1 | AMS39590.1 | AA2016_0159 | AA2016_0651 | Spermidine/putrescine ABC transporter, permease protein. | Spermidine/putrescine ABC transporter ATP-binding protein. | 0.905 |
AMS39101.1 | AMS39592.1 | AA2016_0159 | AA2016_0653 | Spermidine/putrescine ABC transporter, permease protein. | Hypothetical protein; Pfam:pfam13343 Bacterial extracellular solute-binding protein. | 0.846 |
AMS39386.1 | AMS39589.1 | AA2016_0447 | AA2016_0650 | ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | Pfam:pfam00005 ABC transporter. | 0.597 |
AMS39386.1 | AMS39590.1 | AA2016_0447 | AA2016_0651 | ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | Spermidine/putrescine ABC transporter ATP-binding protein. | 0.593 |
AMS39386.1 | AMS39592.1 | AA2016_0447 | AA2016_0653 | ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | Hypothetical protein; Pfam:pfam13343 Bacterial extracellular solute-binding protein. | 0.757 |
AMS39587.1 | AMS39588.1 | AA2016_0648 | AA2016_0649 | Hypothetical protein; Pfam:pfam01546 Peptidase family M20/M25/M40. | Cytosine deaminase-like metal-dependent hydrolase; Pfam:pfam01979 Amidohydrolase family. | 0.654 |
AMS39587.1 | AMS39589.1 | AA2016_0648 | AA2016_0650 | Hypothetical protein; Pfam:pfam01546 Peptidase family M20/M25/M40. | Pfam:pfam00005 ABC transporter. | 0.618 |
AMS39587.1 | AMS39590.1 | AA2016_0648 | AA2016_0651 | Hypothetical protein; Pfam:pfam01546 Peptidase family M20/M25/M40. | Spermidine/putrescine ABC transporter ATP-binding protein. | 0.618 |
AMS39587.1 | AMS39591.1 | AA2016_0648 | AA2016_0652 | Hypothetical protein; Pfam:pfam01546 Peptidase family M20/M25/M40. | Spermidine/putrescine ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | 0.618 |
AMS39588.1 | AMS39587.1 | AA2016_0649 | AA2016_0648 | Cytosine deaminase-like metal-dependent hydrolase; Pfam:pfam01979 Amidohydrolase family. | Hypothetical protein; Pfam:pfam01546 Peptidase family M20/M25/M40. | 0.654 |
AMS39588.1 | AMS39589.1 | AA2016_0649 | AA2016_0650 | Cytosine deaminase-like metal-dependent hydrolase; Pfam:pfam01979 Amidohydrolase family. | Pfam:pfam00005 ABC transporter. | 0.787 |
AMS39588.1 | AMS39590.1 | AA2016_0649 | AA2016_0651 | Cytosine deaminase-like metal-dependent hydrolase; Pfam:pfam01979 Amidohydrolase family. | Spermidine/putrescine ABC transporter ATP-binding protein. | 0.800 |
AMS39588.1 | AMS39591.1 | AA2016_0649 | AA2016_0652 | Cytosine deaminase-like metal-dependent hydrolase; Pfam:pfam01979 Amidohydrolase family. | Spermidine/putrescine ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | 0.784 |
AMS39588.1 | AMS39592.1 | AA2016_0649 | AA2016_0653 | Cytosine deaminase-like metal-dependent hydrolase; Pfam:pfam01979 Amidohydrolase family. | Hypothetical protein; Pfam:pfam13343 Bacterial extracellular solute-binding protein. | 0.561 |
AMS39589.1 | AMS39027.1 | AA2016_0650 | AA2016_0084 | Pfam:pfam00005 ABC transporter. | Mannose-1-phosphate guanyltransferase; Pfam:pfam01061 ABC-2 type transporter. | 0.647 |
AMS39589.1 | AMS39101.1 | AA2016_0650 | AA2016_0159 | Pfam:pfam00005 ABC transporter. | Spermidine/putrescine ABC transporter, permease protein. | 0.633 |
AMS39589.1 | AMS39386.1 | AA2016_0650 | AA2016_0447 | Pfam:pfam00005 ABC transporter. | ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | 0.597 |
AMS39589.1 | AMS39587.1 | AA2016_0650 | AA2016_0648 | Pfam:pfam00005 ABC transporter. | Hypothetical protein; Pfam:pfam01546 Peptidase family M20/M25/M40. | 0.618 |
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