Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS39592.1Hypothetical protein; Pfam:pfam13343 Bacterial extracellular solute-binding protein. (346 aa)    
Predicted Functional Partners:
AMS39590.1
Spermidine/putrescine ABC transporter ATP-binding protein.
 
 
 0.941
AMS39591.1
Spermidine/putrescine ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
  
 0.923
AMS41053.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 
 0.875
AMS39589.1
Pfam:pfam00005 ABC transporter.
 
 
 0.869
AMS39102.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 
 0.867
ydcV_6
Putative spermidine/putrescine ABC transporter, permease protein.
 
 
 0.867
AMS44087.1
Putrescine/spermidine ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 
 0.850
AMS41116.1
Putrescine ABC transport system permease protein PotH.
 
  
 0.849
AMS39101.1
Spermidine/putrescine ABC transporter, permease protein.
 
  
 0.847
AMS41052.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
  
 0.836
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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