STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS39599.1ABC transporter substrate-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle. (642 aa)    
Predicted Functional Partners:
AMS39598.1
Dipeptide ABC transport system permease protein DppB; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
   0.886
AMS39597.1
Peptide ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
   0.882
AMS43282.1
Peptide ABC transporter substrate-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
  
  
  0.646
AMS39596.1
Hypothetical protein; Pfam:pfam00144 Beta-lactamase.
 
     0.620
AMS40009.1
Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
  
  
  0.602
AMS39554.1
Oligopeptide ABC transporter, periplasmic oligopep tide-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
  
  
  0.592
AMS39606.1
Hypothetical protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
 
  
  0.565
AMS39600.1
Putative LysR, transcriptional regulator; Pfam:pfam00126 Bacterial regulatory helix-turn-helix protein, lysR family; Belongs to the LysR transcriptional regulatory family.
       0.535
AMS41982.1
ABC transporter substrate-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
  
  
  0.514
AMS41094.1
Peptide ABC transporter substrate-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
  
  
  0.502
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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