close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39610.1Pfam:pfam09538 Protein of unknown function (FYDLN_acid). (128 aa)    
Predicted Functional Partners:
AMS43147.1
Hypothetical protein; Pfam:pfam10276 Zinc-finger domain.
  
     0.671
AMS39190.1
Hypothetical protein.
 
     0.637
AMS41245.1
Flagellar export protein FliJ.
  
     0.634
AMS43749.1
Pfam:pfam06776 Invasion associated locus B (IalB) protein.
 
    0.627
hisS
Pfam:pfam13393 Histidyl-tRNA synthetase.
  
     0.626
AMS42326.1
Hypothetical protein.
  
     0.611
AMS40396.1
Pfam:pfam06282 Protein of unknown function (DUF1036).
  
     0.607
AMS44215.1
Pfam:pfam07750 GcrA cell cycle regulator.
  
     0.593
AMS42619.1
Pfam:pfam06776 Invasion associated locus B (IalB) protein.
 
    0.585
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
       0.579
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.