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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39625.1Hypothetical protein; Pfam:pfam05532 CsbD-like; Belongs to the UPF0337 (CsbD) family. (65 aa)    
Predicted Functional Partners:
AMS40537.1
Hypothetical protein.
 
  
 0.945
AMS42839.1
Pfam:pfam11450 Protein of unknwon function (DUF3008).
   
    0.786
AMS39298.1
General stress protein.
 
    0.745
AMS42150.1
Hypothetical protein; Pfam:pfam04972 BON domain.
  
  
 0.694
AMS42713.1
Hypothetical protein; Pfam:pfam07311 Dodecin.
   
    0.632
AMS43322.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
 
  
 0.617
AMS40551.1
Acetyltransferase; Pfam:pfam14542 GCN5-related N-acetyl-transferase.
  
    0.601
AMS39711.1
Peptidoglycan-binding protein LysM; Pfam:pfam01476 LysM domain.
  
  
 0.552
AMS42838.1
3-beta hydroxysteroid dehydrogenase; Pfam:pfam13460 NADH(P)-binding.
  
    0.545
AMS39950.1
Peroxiredoxin; Pfam:pfam02566 OsmC-like protein.
  
  
 0.539
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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