Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS39663.1Esterase; Pfam:pfam06850 PHB de-polymerase C-terminus. (423 aa)    
Predicted Functional Partners:
AMS42311.1
Pfam:pfam07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus.
 
  
 0.982
AMS40291.1
Polyhydroxyalkanoate synthesis repressor PhaR; Pfam:pfam07879 PHB/PHA accumulation regulator DNA-binding domain.
 
   
 0.743
AMS42758.1
Pfam:pfam09361 Phasin protein.
  
   
 0.572
clpX
ATP-dependent protease; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
  
    0.531
AMS39664.1
Pfam:pfam07045 Protein of unknown function (DUF1330).
 
     0.503
AMS39662.1
Transglutaminase; Pfam:pfam06035 Bacterial transglutaminase-like cysteine proteinase BTLCP.
       0.422
AMS43789.1
Hypothetical protein; Pfam:pfam09413 Domain of unknown function (DUF2007).
   
    0.416
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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