rpmI protein (Aminobacter aminovorans) - STRING interaction network

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rpmI

Pfam:pfam01632 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. (67 aa)

Predicted Functional Partners:

rplT

0.997

rpsD

0.992

rplM

0.992

rpmF

0.990

rpsN

0.990

rpsB

0.990

rpsF

0.990

rpsR

0.990

rpsP

0.989

rpmJ

0.989

Your Current Organism:

Aminobacter aminovorans

NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplT	AA2016_4017	AA2016_0743	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.997
rplM	rpmF	AA2016_4017	AA2016_1354	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Pfam:pfam01783 Ribosomal L32p protein family; Belongs to the bacterial ribosomal protein bL32 family.	0.988
rplM	rpmI	AA2016_4017	AA2016_0744	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Pfam:pfam01632 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.992
rplM	rpmJ	AA2016_4017	AA2016_1467	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Pfam:pfam00444 Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.	0.989
rplM	rpsB	AA2016_4017	AA2016_3822	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Pfam:pfam00318 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.997
rplM	rpsD	AA2016_4017	AA2016_3917	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.996
rplM	rpsF	AA2016_4017	AA2016_4538	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.989
rplM	rpsN	AA2016_4017	AA2016_3517	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.992
rplM	rpsP	AA2016_4017	AA2016_0840	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Pfam:pfam00886 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.993
rplM	rpsR	AA2016_4017	AA2016_4539	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.994
rplT	rplM	AA2016_0743	AA2016_4017	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.997
rplT	rpmF	AA2016_0743	AA2016_1354	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	Pfam:pfam01783 Ribosomal L32p protein family; Belongs to the bacterial ribosomal protein bL32 family.	0.991
rplT	rpmI	AA2016_0743	AA2016_0744	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	Pfam:pfam01632 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.997
rplT	rpmJ	AA2016_0743	AA2016_1467	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	Pfam:pfam00444 Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.	0.980
rplT	rpsB	AA2016_0743	AA2016_3822	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	Pfam:pfam00318 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.994
rplT	rpsD	AA2016_0743	AA2016_3917	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.992
rplT	rpsF	AA2016_0743	AA2016_4538	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.989
rplT	rpsN	AA2016_0743	AA2016_3517	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.983
rplT	rpsP	AA2016_0743	AA2016_0840	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	Pfam:pfam00886 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.991
rplT	rpsR	AA2016_0743	AA2016_4539	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.991

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