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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39685.12-hydroxymuconic semialdehyde hydrolase; Pfam:pfam12697 Alpha/beta hydrolase family. (257 aa)    
Predicted Functional Partners:
AMS39686.1
Pfam:pfam03594 Benzoate membrane transport protein.
     
 0.791
AMS42960.1
Hypothetical protein; Pfam:pfam03981 Ubiquinol-cytochrome C chaperone.
  
     0.692
AMS43341.1
Pfam:pfam04800 ETC complex I subunit conserved region.
 
     0.611
AMS42684.1
ATPase; Pfam:pfam07542 ATP12 chaperone protein.
  
     0.567
AMS39687.1
Pfam:pfam11014 Protein of unknown function (DUF2852).
       0.529
AMS40998.1
Sterol-binding protein; Pfam:pfam02036 SCP-2 sterol transfer family.
  
     0.469
AMS39688.1
Zinc metallopeptidase; Pfam:pfam01863 Protein of unknown function DUF45.
 
     0.455
AMS42452.1
Serine protease; Pfam:pfam13365 Trypsin-like peptidase domain; Belongs to the peptidase S1C family.
 
 
 0.433
AMS42778.1
Pfam:pfam06170 Protein of unknown function (DUF983).
  
     0.431
AMS41047.1
Pfam:pfam07787 Protein of unknown function (DUF1625).
 
     0.429
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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