STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39687.1Pfam:pfam11014 Protein of unknown function (DUF2852). (146 aa)    
Predicted Functional Partners:
AMS42982.1
Membrane protein; Pfam:pfam06271 RDD family.
 
    0.674
AMS44083.1
Phasin; Pfam:pfam09361 Phasin protein.
  
     0.659
AMS43749.1
Pfam:pfam06776 Invasion associated locus B (IalB) protein.
  
     0.619
AMS39165.1
Pfam:pfam06035 Bacterial transglutaminase-like cysteine proteinase BTLCP.
  
     0.609
AMS39662.1
Transglutaminase; Pfam:pfam06035 Bacterial transglutaminase-like cysteine proteinase BTLCP.
  
     0.583
AMS39688.1
Zinc metallopeptidase; Pfam:pfam01863 Protein of unknown function DUF45.
       0.583
AMS43729.1
Hypothetical protein.
  
     0.578
AMS42476.1
Phasin; Pfam:pfam09361 Phasin protein.
  
     0.577
AMS41087.1
Signal peptide protein; Pfam:pfam06035 Bacterial transglutaminase-like cysteine proteinase BTLCP.
  
     0.571
AMS42212.1
Putative periplasmic protein; Pfam:pfam06035 Bacterial transglutaminase-like cysteine proteinase BTLCP.
  
     0.567
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.