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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39697.1LuxR family transcriptional regulator; Pfam:pfam12705 PD-(D/E)XK nuclease superfamily. (1041 aa)    
Predicted Functional Partners:
AMS39696.1
Hypothetical protein; Pfam:pfam13361 UvrD-like helicase C-terminal domain; Belongs to the helicase family. UvrD subfamily.
 
   
 0.964
AMS39700.1
Alkaline phosphatase; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
     0.883
AMS39699.1
Hypothetical protein; Pfam:pfam02367 Uncharacterized P-loop hydrolase UPF0079.
 
     0.846
AMS39698.1
Mannose-1-phosphate guanylyltransferase; Pfam:pfam12804 MobA-like NTP transferase domain.
       0.818
AMS39960.1
Membrane protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
     0.796
AMS39749.1
Hypothetical protein; Pfam:pfam06144 DNA polymerase III, delta subunit.
 
   
 0.792
AMS39705.1
Histidine kinase; Pfam:pfam13756 Stimulus-sensing domain.
 
     0.760
AMS40393.1
Pfam:pfam10073 Uncharacterized protein conserved in bacteria (DUF2312); Belongs to the UPF0335 family.
  
     0.742
AMS39631.1
Pfam:pfam13417 Glutathione S-transferase, N-terminal domain.
  
     0.740
AMS39730.1
Calcium-binding protein; Pfam:pfam04280 Tim44-like domain.
  
     0.734
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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