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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39726.1Pfam:pfam07182 Protein of unknown function (DUF1402). (319 aa)    
Predicted Functional Partners:
AMS41015.1
Hypothetical protein; Pfam:pfam02120 Flagellar hook-length control protein FliK.
 
    0.787
AMS41350.1
Hypothetical protein.
  
     0.748
AMS41768.1
Pfam:pfam13502 AsmA-like C-terminal region.
  
    0.734
AMS43488.1
Hypothetical protein.
  
     0.719
AMS41369.1
Pfam:pfam07886 BA14K-like protein.
  
     0.706
AMS42069.1
Pfam:pfam09832 Uncharacterized protein conserved in bacteria (DUF2059).
  
     0.657
AMS40486.1
Hypothetical protein; Pfam:pfam13747 Domain of unknown function (DUF4164).
  
     0.653
AMS43779.1
Hypothetical protein.
  
     0.652
AMS42795.1
Organic solvent ABC transporter substrate-binding protein; Pfam:pfam02470 mce related protein.
  
   
 0.621
AMS43608.1
Hypothetical protein; Pfam:pfam01471 Putative peptidoglycan binding domain.
 
   
 0.602
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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