Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AMS39743.1Pfam:pfam03190 Protein of unknown function, DUF255. (672 aa)    
Predicted Functional Partners:
AMS40334.1
Pfam:pfam00150 Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 
 0.798
AMS40874.1
Hypothetical protein; Pfam:pfam00150 Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 
 0.798
mnmE
tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
       0.646
AMS43171.1
Pfam:pfam11924 Protein of unknown function (DUF3442).
  
 
 
 0.632
AMS39216.1
Hypothetical protein.
    
 
 0.558
AMS39425.1
Hypothetical protein.
    
 
 0.558
AMS41016.1
Hypothetical protein.
    
 
 0.558
AMS41147.1
Hypothetical protein.
    
 
 0.558
AMS41652.1
Pfam:pfam11924 Protein of unknown function (DUF3442).
    
 
 0.558
AMS42234.1
Hypothetical protein; Pfam:pfam00082 Subtilase family.
    
 
 0.558
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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