Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS39768.1Pfam:pfam04241 Protein of unknown function (DUF423). (118 aa)    
Predicted Functional Partners:
AMS40752.1
Hypothetical protein.
  
     0.761
AMS39181.1
Pfam:pfam06620 Protein of unknown function (DUF1150).
  
     0.724
AMS41819.1
Hypothetical protein.
 
     0.713
AMS43507.1
Pfam:pfam13505 Outer membrane protein beta-barrel domain.
  
     0.711
AMS44204.1
Membrane protein.
  
     0.696
AMS40312.1
Hypothetical protein.
  
     0.683
AMS42326.1
Hypothetical protein.
  
     0.677
AMS43749.1
Pfam:pfam06776 Invasion associated locus B (IalB) protein.
  
     0.677
AMS40843.1
Hypothetical protein.
 
     0.675
AMS38985.1
Hypothetical protein.
  
     0.650
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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