STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39798.1Pfam:pfam00005 ABC transporter. (271 aa)    
Predicted Functional Partners:
AMS39796.1
ABC transporter permease; Pfam:pfam01032 FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.979
AMS39797.1
Iron ABC transporter permease; Pfam:pfam01032 FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.979
AMS39795.1
Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB; Pfam:pfam01497 Periplasmic binding protein.
 
 
 0.941
AMS40792.1
Hemin ABC transporter permease; Pfam:pfam01032 FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.908
AMS41272.1
ABC transporter permease; Pfam:pfam01032 FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.905
AMS44183.1
Hypothetical protein; Pfam:pfam01032 FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.903
AMS42012.1
Heme ABC transporter permease; Pfam:pfam01032 FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.901
AMS40791.1
Iron(III) dicitrate-binding protein; Pfam:pfam01497 Periplasmic binding protein.
 
 
 0.827
AMS39124.1
Iron ABC transporter permease; Pfam:pfam01032 FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.795
AMS41273.1
Hypothetical protein; Pfam:pfam01497 Periplasmic binding protein.
 
 
 0.769
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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