STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39810.1Hypothetical protein; Pfam:pfam08327 Activator of Hsp90 ATPase-like protein. (162 aa)    
Predicted Functional Partners:
AMS39811.1
Hypothetical protein; Pfam:pfam12840 Helix-turn-helix domain.
 
    0.913
AMS40746.1
Transcriptional regulator, ArsR family; Pfam:pfam12840 Helix-turn-helix domain.
 
    0.770
AMS42499.1
ArsR family transcriptional regulator; Pfam:pfam12840 Helix-turn-helix domain.
 
     0.723
AMS44279.1
Hypothetical protein; Pfam:pfam12840 Helix-turn-helix domain.
 
    0.723
AMS41493.1
ArsR family transcriptional regulator; Pfam:pfam12840 Helix-turn-helix domain.
 
    0.699
AMS43021.1
ArsR family transcriptional regulator; Pfam:pfam12840 Helix-turn-helix domain.
 
    0.690
AMS43498.1
ArsR family transcriptional regulator; Pfam:pfam12840 Helix-turn-helix domain.
 
    0.636
AMS40409.1
Pfam:pfam01022 Bacterial regulatory protein, arsR family.
 
    0.518
AMS42092.1
Hypothetical protein; Pfam:pfam08327 Activator of Hsp90 ATPase-like protein.
 
    
0.515
AMS39813.1
RNA polymerase, sigma-24 subunit, ECF subfamily; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family.
 
     0.452
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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