STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39812.1FAD-linked oxidase; Pfam:pfam01565 FAD binding domain. (479 aa)    
Predicted Functional Partners:
AMS39813.1
RNA polymerase, sigma-24 subunit, ECF subfamily; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family.
       0.671
AMS42028.1
Pfam:pfam01070 FMN-dependent dehydrogenase.
 
 0.524
AMS39814.1
Alkylhydroperoxidase like protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.470
AMS40691.1
Pfam:pfam01012 Electron transfer flavoprotein domain.
  
 
 0.459
AMS39811.1
Hypothetical protein; Pfam:pfam12840 Helix-turn-helix domain.
       0.454
AMS40947.1
Glutamate synthase; Pfam:pfam01645 Conserved region in glutamate synthase.
     
 0.432
AMS41911.1
Pfam:pfam01040 UbiA prenyltransferase family; Belongs to the UbiA prenyltransferase family.
  
 
 0.431
AMS41856.1
NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
   
 0.426
AMS44299.1
Pfam:pfam01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit.
   
 0.426
AMS39810.1
Hypothetical protein; Pfam:pfam08327 Activator of Hsp90 ATPase-like protein.
  
    0.421
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.