STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39830.1Pfam:pfam02190 ATP-dependent protease La (LON) domain. (223 aa)    
Predicted Functional Partners:
AMS38947.1
Thiamine biosynthesis protein ThiF; Pfam:pfam00899 ThiF family.
    
 0.794
AMS39829.1
Pfam:pfam03966 Trm112p-like protein; Belongs to the UPF0434 family.
       0.746
AMS39831.1
Thioredoxin; Pfam:pfam00085 Thioredoxin.
 
  
 0.718
AMS39832.1
DNA-binding protein; Pfam:pfam04073 Aminoacyl-tRNA editing domain.
       0.520
AMS43722.1
Pfam:pfam01555 DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
  
     0.447
AMS39960.1
Membrane protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
     0.446
AMS43288.1
Cysteine desulfurase; Pfam:pfam12796 Ankyrin repeats (3 copies).
   
 0.431
AMS42155.1
Putative exonuclease of the beta-lactamase fold involved in RNA processing; Pfam:pfam10996 Beta-Casp domain.
     
 0.409
AMS44242.1
Beta-lactamase.
     
 0.409
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.