STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39835.1Pfam:pfam00155 Aminotransferase class I and II. (368 aa)    
Predicted Functional Partners:
AMS40735.1
Pfam:pfam00696 Amino acid kinase family; Belongs to the aspartokinase family.
  
 0.630
AMS39836.1
Putative Transcriptional regulator, LuxR family; Pfam:pfam00196 Bacterial regulatory proteins, luxR family.
       0.536
AMS40947.1
Glutamate synthase; Pfam:pfam01645 Conserved region in glutamate synthase.
  
  
 0.509
AMS44103.1
Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
    0.481
AMS39833.1
Pfam:pfam02423 Ornithine cyclodeaminase/mu-crystallin family.
     
 0.436
AMS41710.1
Ornithine decarboxylase; Pfam:pfam02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
 
  
 0.431
AMS43827.1
Pfam:pfam00202 Aminotransferase class-III.
 
 
 0.409
AMS39834.1
Arginase; Pfam:pfam00491 Arginase family; Belongs to the arginase family.
     
 0.405
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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