STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS39836.1Putative Transcriptional regulator, LuxR family; Pfam:pfam00196 Bacterial regulatory proteins, luxR family. (277 aa)    
Predicted Functional Partners:
AMS40760.1
Hypothetical protein; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
 0.867
AMS40554.1
Hypothetical protein; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
 0.592
AMS39199.1
Hypothetical protein; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
 0.560
AMS44355.1
Diguanylate cyclase; Pfam:pfam00990 GGDEF domain.
  
 
 0.544
AMS39835.1
Pfam:pfam00155 Aminotransferase class I and II.
       0.536
AMS44197.1
Histidine kinase; Pfam:pfam12860 PAS fold.
  
 
 0.495
AMS40285.1
Chemotaxis protein CheY; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
 0.448
AMS42364.1
PAS sensor protein; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
 0.430
AMS41609.1
Pfam:pfam01266 FAD dependent oxidoreductase.
  
    0.409
AMS39479.1
Hypothetical protein; Pfam:pfam00563 EAL domain.
  
 
 0.403
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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