Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS39856.1Peptidase; Pfam:pfam01244 Membrane dipeptidase (Peptidase family M19). (352 aa)    
Predicted Functional Partners:
AMS40851.1
Glutamine amidotransferase; Pfam:pfam07722 Peptidase C26.
      0.900
AMS39855.1
ABC transporter substrate-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
 
     0.861
AMS39854.1
Peptide ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
     0.663
AMS39853.1
Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
     0.643
AMS39623.1
Hypothetical protein; Pfam:pfam02615 Malate/L-lactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
  
    0.615
AMS40780.1
Pfam:pfam02615 Malate/L-lactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
  
    0.615
AMS41089.1
Hypothetical protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
 
     0.612
AMS39851.1
Pfam:pfam00005 ABC transporter.
 
     0.593
AMS39852.1
Peptide ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
    0.570
AMS42919.1
Peptide ABC transporter substrate-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
 
     0.497
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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