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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39864.1Pfam:pfam06803 Protein of unknown function (DUF1232). (122 aa)    
Predicted Functional Partners:
AMS39865.1
Pfam:pfam01329 Pterin 4 alpha carbinolamine dehydratase.
       0.572
AMS39863.1
Signal peptide protein.
       0.508
AMS43569.1
Sel1 domain-containing protein repeat-containing protein.
 
     0.484
AMS39866.1
Protein tyrosine phosphatase; Pfam:pfam01451 Low molecular weight phosphotyrosine protein phosphatase.
       0.466
AMS41783.1
Pfam:pfam09838 Uncharacterized protein conserved in bacteria (DUF2065).
  
     0.450
AMS41892.1
Protein tyrosine/serine phosphatase.
  
     0.443
AMS42942.1
Pfam:pfam11003 Protein of unknown function (DUF2842).
  
     0.438
AMS41241.1
Pfam:pfam06627 Protein of unknown function (DUF1153).
  
     0.418
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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