STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39871.1Membrane protein; Pfam:pfam01027 Inhibitor of apoptosis-promoting Bax1; Belongs to the BI1 family. (283 aa)    
Predicted Functional Partners:
AMS39872.1
Hypothetical protein; Pfam:pfam13420 Acetyltransferase (GNAT) domain.
       0.591
AMS39730.1
Calcium-binding protein; Pfam:pfam04280 Tim44-like domain.
 
  
 0.589
AMS39870.1
Glycosyl transferase family 1; Pfam:pfam02687 FtsX-like permease family.
       0.570
yidC
Insertase; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
 
     0.541
AMS40437.1
Putative cytoplasmic protein; Pfam:pfam06242 Protein of unknown function (DUF1013).
  
     0.491
AMS39672.1
Pfam:pfam01435 Peptidase family M48.
  
  
 0.472
htpX
Peptidase; Pfam:pfam01435 Peptidase family M48; Belongs to the peptidase M48B family.
  
  
 0.472
priA
Primosome assembly protein PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
 
     0.448
rpsU
Pfam:pfam01165 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
  
     0.446
ftsH
Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
  
 0.412
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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