Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS39872.1Hypothetical protein; Pfam:pfam13420 Acetyltransferase (GNAT) domain. (191 aa)    
Predicted Functional Partners:
ureA
Pfam:pfam00547 Urease, gamma subunit; Belongs to the urease gamma subunit family.
  
    0.655
AMS39871.1
Membrane protein; Pfam:pfam01027 Inhibitor of apoptosis-promoting Bax1; Belongs to the BI1 family.
       0.619
ureD
Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
  
    0.616
AMS38948.1
Hypothetical protein; Pfam:pfam00583 Acetyltransferase (GNAT) family.
    
 0.513
AMS39870.1
Glycosyl transferase family 1; Pfam:pfam02687 FtsX-like permease family.
       0.472
murJ
Multidrug transporter MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
   
    0.416
ureC
Pfam:pfam00449 Urease alpha-subunit, N-terminal domain.
  
    0.406
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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