Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS39878.1Hypothetical protein; Pfam:pfam04234 CopC domain. (548 aa)    
Predicted Functional Partners:
AMS43935.1
Nuclear export factor GLE1; Pfam:pfam07987 Domain of unkown function (DUF1775).
 
  
 0.994
AMS39877.1
Pfam:pfam04314 Protein of unknown function (DUF461).
 
  
 0.965
AMS40582.1
ATPase; Pfam:pfam00122 E1-E2 ATPase.
     
 0.639
AMS39086.1
Pfam:pfam00175 Oxidoreductase NAD-binding domain.
  
    0.635
AMS43513.1
Propeptide, pepSY amd peptidase M4; Pfam:pfam13172 PepSY-associated TM helix.
  
    0.634
AMS43936.1
Copper binding protein; Pfam:pfam04234 CopC domain.
  
  
 0.587
AMS44382.1
Pfam:pfam00800 Prephenate dehydratase.
     
 0.575
AMS39879.1
Hypothetical protein; Pfam:pfam01370 NAD dependent epimerase/dehydratase family.
       0.558
AMS39876.1
Hypothetical protein.
       0.551
AMS41266.1
Pfam:pfam07732 Multicopper oxidase.
 
   
 0.519
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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