STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39878.1Hypothetical protein; Pfam:pfam04234 CopC domain. (548 aa)    
Predicted Functional Partners:
AMS43935.1
Nuclear export factor GLE1; Pfam:pfam07987 Domain of unkown function (DUF1775).
 
  
 0.995
AMS39877.1
Pfam:pfam04314 Protein of unknown function (DUF461).
 
    0.946
AMS43936.1
Copper binding protein; Pfam:pfam04234 CopC domain.
 
  
0.683
AMS39086.1
Pfam:pfam00175 Oxidoreductase NAD-binding domain.
  
    0.592
AMS43513.1
Propeptide, pepSY amd peptidase M4; Pfam:pfam13172 PepSY-associated TM helix.
  
    0.591
AMS39876.1
Hypothetical protein.
       0.567
AMS39879.1
Hypothetical protein; Pfam:pfam01370 NAD dependent epimerase/dehydratase family.
       0.558
AMS40582.1
ATPase; Pfam:pfam00122 E1-E2 ATPase.
     
 0.540
AMS43516.1
Nickel-resistant pritein NirB; Pfam:pfam02583 Metal-sensitive transcriptional repressor.
     
 0.521
AMS39880.1
Hypothetical protein; Pfam:pfam13577 SnoaL-like domain.
       0.517
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.