STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AMS39884.1Acetylpolyamine aminohydrolase; Pfam:pfam00850 Histone deacetylase domain. (341 aa)    
Predicted Functional Partners:
AMS44236.1
Hypothetical protein; Pfam:pfam01471 Putative peptidoglycan binding domain.
   
 0.816
AMS39885.1
Pfam:pfam00583 Acetyltransferase (GNAT) family.
     
 0.791
AMS41293.1
ATPase AAA; Pfam:pfam00004 ATPase family associated with various cellular activities (AAA).
   
 0.732
cobB-2
NAD-dependent deacetylase; Pfam:pfam02146 Sir2 family; Belongs to the sirtuin family. Class III subfamily.
    
 0.696
AMS40143.1
Hypothetical protein.
   
 0.637
AMS40843.1
Hypothetical protein.
   
 0.637
AMS43288.1
Cysteine desulfurase; Pfam:pfam12796 Ankyrin repeats (3 copies).
  
 0.607
AMS39773.1
Amine oxidase; Pfam:pfam01593 Flavin containing amine oxidoreductase.
   
 0.598
AMS41986.1
Flavin monoamine oxidase; Pfam:pfam01593 Flavin containing amine oxidoreductase.
   
 0.598
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
   0.575
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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