STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39886.1Pfam:pfam10984 Protein of unknown function (DUF2794). (128 aa)    
Predicted Functional Partners:
AMS39887.1
Pfam:pfam06764 Protein of unknown function (DUF1223).
 
     0.729
AMS42320.1
Hypothetical protein; Pfam:pfam01592 NifU-like N terminal domain.
  
     0.693
AMS44143.1
Pfam:pfam11164 Protein of unknown function (DUF2948).
  
     0.690
AMS39497.1
ATPase; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.671
AMS42821.1
Hypothetical protein; Pfam:pfam07345 Domain of unknown function (DUF1476).
  
     0.663
AMS41241.1
Pfam:pfam06627 Protein of unknown function (DUF1153).
  
     0.654
AMS40194.1
Pfam:pfam07896 Protein of unknown function (DUF1674).
  
     0.636
AMS39495.1
Pfam:pfam06319 Protein of unknown function (DUF1052).
  
     0.628
AMS42618.1
Hypothetical protein; Pfam:pfam08755 Hemimethylated DNA-binding protein YccV like.
 
     0.615
AMS44215.1
Pfam:pfam07750 GcrA cell cycle regulator.
  
     0.607
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.