Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS39889.1Hypothetical protein; Pfam:pfam03969 AFG1-like ATPase. (395 aa)    
Predicted Functional Partners:
AMS39890.1
Membrane protein; Pfam:pfam02974 Protease inhibitor Inh.
       0.799
sdhB
Succinate dehydrogenase iron-sulfur subunit; Pfam:pfam13085 2Fe-2S iron-sulfur cluster binding domain; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
    0.793
AMS39941.1
Succinate dehydrogenase; Pfam:pfam00890 FAD binding domain; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
 
    0.784
AMS39939.1
Pfam:pfam01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit.
 
   
 0.704
AMS43578.1
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
 
     0.655
rpsI
Pfam:pfam00380 Ribosomal protein S9/S16; Belongs to the universal ribosomal protein uS9 family.
  
   0.590
AMS39894.1
Septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
 
     0.531
ubiG
3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
  
     0.511
AMS40724.1
Hypothetical protein.
  
     0.508
AMS39892.1
2-methylthioadenine synthase; Pfam:pfam00919 Uncharacterized protein family UPF0004.
     
 0.490
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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