STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39912.1Lysine transporter LysE; Pfam:pfam01810 LysE type translocator. (214 aa)    
Predicted Functional Partners:
AMS39911.1
Putative glyoxalase family protein; Pfam:pfam12681 Glyoxalase-like domain.
       0.773
AMS39913.1
Hypothetical protein.
       0.773
AMS39914.1
Glucose-1-dehydrogenase; Pfam:pfam00106 short chain dehydrogenase.
       0.773
AMS40187.1
Lysine transporter LysE; Pfam:pfam01810 LysE type translocator.
  
     0.771
AMS39915.1
Dihydrolipoamide dehydrogenase; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase.
       0.686
AMS39910.1
Hypothetical protein; Pfam:pfam01124 MAPEG family.
       0.652
AMS39909.1
Dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
       0.427
AMS39908.1
MFS transporter; Pfam:pfam02779 Transketolase, pyrimidine binding domain.
       0.403
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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