STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
AMS39914.1Glucose-1-dehydrogenase; Pfam:pfam00106 short chain dehydrogenase. (251 aa)    
Predicted Functional Partners:
AMS39911.1
Putative glyoxalase family protein; Pfam:pfam12681 Glyoxalase-like domain.
       0.773
AMS39912.1
Lysine transporter LysE; Pfam:pfam01810 LysE type translocator.
       0.773
AMS39913.1
Hypothetical protein.
       0.773
AMS39915.1
Dihydrolipoamide dehydrogenase; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.721
AMS39910.1
Hypothetical protein; Pfam:pfam01124 MAPEG family.
       0.651
AMS42801.1
3-oxoacyl-ACP reductase; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase.
  
     0.540
AMS39909.1
Dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
  
 
 0.472
AMS39908.1
MFS transporter; Pfam:pfam02779 Transketolase, pyrimidine binding domain.
   
 
 0.461
AMS43496.1
Oxidoreductase, short chain dehydrogenase/reductase family; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase.
 
  
 0.431
AMS43322.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.419
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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