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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39926.1Hypothetical protein. (127 aa)    
Predicted Functional Partners:
AMS42408.1
Globin; Pfam:pfam01152 Bacterial-like globin.
  
     0.690
AMS39927.1
Hypothetical protein; Pfam:pfam01638 HxlR-like helix-turn-helix.
       0.561
AMS39928.1
Amino acid ABC transporter; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
       0.553
AMS39929.1
Hypothetical protein; Pfam:pfam08241 Methyltransferase domain.
       0.553
AMS42016.1
Abortive infection protein.
 
     0.510
AMS43517.1
Pfam:pfam00106 short chain dehydrogenase.
  
     0.494
AMS44072.1
Transcriptional regulator, AraC family; Pfam:pfam12833 Helix-turn-helix domain.
 
     0.490
AMS39930.1
Hypothetical protein; Pfam:pfam12823 Domain of unknown function (DUF3817).
 
     0.489
AMS39978.1
EcaC; Pfam:pfam14534 Domain of unknown function (DUF4440).
  
     0.461
AMS40803.1
Isomerase; Pfam:pfam12680 SnoaL-like domain.
 
    0.448
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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