STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS39950.1Peroxiredoxin; Pfam:pfam02566 OsmC-like protein. (141 aa)    
Predicted Functional Partners:
AMS43322.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.881
AMS40828.1
DNA starvation/stationary phase protection protein Dps; Pfam:pfam00210 Ferritin-like domain; Belongs to the Dps family.
  
  
 0.736
AMS43137.1
CsbD family protein; Pfam:pfam05532 CsbD-like; Belongs to the UPF0337 (CsbD) family.
 
  
 0.644
AMS44255.1
Hypothetical protein; Pfam:pfam07411 Domain of unknown function (DUF1508).
   
    0.640
AMS39806.1
Pfam:pfam00248 Aldo/keto reductase family.
  
  
 0.623
AMS40543.1
Pfam:pfam05957 Bacterial protein of unknown function (DUF883).
   
  
 0.623
AMS40554.1
Hypothetical protein; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  
 0.616
AMS40001.1
Pfam:pfam01028 Eukaryotic DNA topoisomerase I, catalytic core.
  
    0.606
AMS44355.1
Diguanylate cyclase; Pfam:pfam00990 GGDEF domain.
   
  
 0.602
AMS39154.1
PrkA family serine protein kinase; Pfam:pfam08298 PrkA AAA domain.
   
  
 0.591
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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