STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Cooccurrence
Coexpression
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[Homology]
Score
AMS39960.1Membrane protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). (218 aa)    
Predicted Functional Partners:
AMS39697.1
LuxR family transcriptional regulator; Pfam:pfam12705 PD-(D/E)XK nuclease superfamily.
 
     0.797
lptD
Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
   
 0.754
AMS39959.1
Cell division protein FtsK; Pfam:pfam01580 FtsK/SpoIIIE family.
  
  
 0.727
AMS39696.1
Hypothetical protein; Pfam:pfam13361 UvrD-like helicase C-terminal domain; Belongs to the helicase family. UvrD subfamily.
 
     0.705
AMS40437.1
Putative cytoplasmic protein; Pfam:pfam06242 Protein of unknown function (DUF1013).
  
     0.696
AMS42961.1
SmpA/OmlA domain-containing protein; Pfam:pfam04355 SmpA / OmlA family.
 
 
 
 0.665
AMS42291.1
Hypothetical protein; Pfam:pfam06347 Bacterial SH3 domain.
   
 
 0.659
AMS42386.1
Cell wall hydrolase; Pfam:pfam01520 N-acetylmuramoyl-L-alanine amidase.
    
 
 0.657
AMS41871.1
Multidrug ABC transporter substrate-binding protein; Pfam:pfam12704 MacB-like periplasmic core domain.
   
 
 0.642
AMS41874.1
Multidrug ABC transporter substrate-binding protein; Pfam:pfam12704 MacB-like periplasmic core domain.
   
 
 0.642
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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