Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS39964.1ErfK/YbiS/YcfS/YnhG family protein. (176 aa)    
Predicted Functional Partners:
AMS39963.1
Pfam:pfam00072 Response regulator receiver domain.
 
     0.748
AMS41312.1
RNA-binding protein; Pfam:pfam13709 Domain of unknown function (DUF4159).
  
     0.597
AMS41311.1
Pfam:pfam07090 Protein of unknown function (DUF1355).
  
     0.571
AMS40191.1
Pfam:pfam07940 Heparinase II/III-like protein.
  
     0.570
AMS40680.1
Hypothetical protein; Pfam:pfam13779 Domain of unknown function (DUF4175).
  
     0.549
AMS39975.1
Pfam:pfam07219 HemY protein N-terminus.
  
     0.539
AMS43789.1
Hypothetical protein; Pfam:pfam09413 Domain of unknown function (DUF2007).
  
     0.521
AMS39697.1
LuxR family transcriptional regulator; Pfam:pfam12705 PD-(D/E)XK nuclease superfamily.
 
   
 0.508
AMS39962.1
cAMP-dependent protein kinase; Pfam:pfam00027 Cyclic nucleotide-binding domain.
       0.489
AMS40296.1
Helicase; Pfam:pfam00271 Helicase conserved C-terminal domain.
  
     0.488
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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