Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AMS39997.1Pfam:pfam00535 Glycosyl transferase family 2. (316 aa)    
Predicted Functional Partners:
AMS39996.1
Pfam:pfam00535 Glycosyl transferase family 2.
 
 
 0.918
AMS39994.1
Glycosyltransferase, succinoglycan biosynthesis protein ExoL.
 
  
 0.908
AMS39995.1
Succinoglycan biosynthesis protein exoa; Pfam:pfam00535 Glycosyl transferase family 2.
 
 
 0.905
AMS39999.1
Hypothetical protein; Pfam:pfam13614 AAA domain.
 
  
 0.834
AMS40788.1
Pfam:pfam00535 Glycosyl transferase family 2.
  
     0.763
AMS39490.1
Pfam:pfam00535 Glycosyl transferase family 2.
  
     0.702
AMS39998.1
UTP--glucose-1-phosphate uridylyltransferase; Pfam:pfam00483 Nucleotidyl transferase.
     
 0.690
AMS42948.1
UDP-phosphate glucose phosphotransferase; Pfam:pfam02397 Bacterial sugar transferase.
 
  
 0.672
AMS39983.1
Hypothetical protein; Pfam:pfam02563 Polysaccharide biosynthesis/export protein.
 
  
 0.666
AMS39982.1
Hypothetical protein; Pfam:pfam04932 O-Antigen ligase.
 
  
 0.649
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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