STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40017.1Pfam:pfam02954 Bacterial regulatory protein, Fis family. (321 aa)    
Predicted Functional Partners:
AMS40019.1
Pfam:pfam00171 Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
 
 
 
 0.730
AMS42301.1
Dihydroxyacetone kinase; Pfam:pfam02733 Dak1 domain.
   
 
 0.719
AMS40018.1
Aldehyde-activating protein; Pfam:pfam04828 Glutathione-dependent formaldehyde-activating enzyme.
       0.608
AMS40016.1
FAD-dependent oxidoreductase; Pfam:pfam13738 Pyridine nucleotide-disulphide oxidoreductase.
 
     0.584
AMS40020.1
Pfam:pfam05610 Protein of unknown function (DUF779).
 
     0.564
AMS40015.1
ATPase AAA; Pfam:pfam00158 Sigma-54 interaction domain.
 
    
0.401
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.