STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40036.15-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family. (312 aa)    
Predicted Functional Partners:
AMS39843.1
Ureidoglycolate lyase; Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family.
  
  
 
0.916
AMS39848.1
Oxidoreductase; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase.
  
 0.913
AMS40037.1
Nitrate ABC transporter permease; Pfam:pfam09084 NMT1/THI5 like.
  
  
 0.664
AMS40035.1
Pfam:pfam13417 Glutathione S-transferase, N-terminal domain.
  
  
 0.605
AMS40034.1
Putative NADH dehydrogenase/NAD(P)H nitroreductase; Pfam:pfam00881 Nitroreductase family.
  
  
 0.599
AMS40038.1
Glyoxalase; Pfam:pfam00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
     
 0.592
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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