STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40093.1Sugar isomerase; Pfam:pfam01380 SIS domain. (348 aa)    
Predicted Functional Partners:
AMS40094.1
PfkB domain protein; Pfam:pfam00294 pfkB family carbohydrate kinase.
 
 
 0.913
AMS40092.1
Pfam:pfam02538 Hydantoinase B/oxoprolinase.
       0.779
AMS40091.1
DfpF; Pfam:pfam01968 Hydantoinase/oxoprolinase.
       0.778
glmS
Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
 
  
 0.592
AMS40090.1
Transcriptional regulator, LysR family; Pfam:pfam03466 LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
       0.554
AMS40098.1
Putative peptide transporter subunit: periplasmic-binding component of ABC superfamily protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
       0.483
AMS40096.1
Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
       0.478
AMS40097.1
Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
       0.477
AMS40095.1
Glutathione transporter ATP-binding protein; Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily.
       0.474
AMS39703.1
Pfam:pfam03610 PTS system fructose IIA component.
  
  
 0.439
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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