Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS40126.1Pfam:pfam03401 Tripartite tricarboxylate transporter family receptor. (321 aa)    
Predicted Functional Partners:
AMS40122.1
Hypothetical protein; Pfam:pfam01970 Tripartite tricarboxylate transporter TctA family.
 
  
 0.942
AMS40123.1
Hypothetical protein; Pfam:pfam07331 Tripartite tricarboxylate transporter TctB family.
 
  
 0.898
AMS38971.1
Pfam:pfam01970 Tripartite tricarboxylate transporter TctA family.
 
  
 0.897
AMS42192.1
Hypothetical protein; Pfam:pfam01970 Tripartite tricarboxylate transporter TctA family.
 
  
 0.897
AMS42193.1
Membrane protein; Pfam:pfam07331 Tripartite tricarboxylate transporter TctB family.
 
  
 0.801
AMS38972.1
Putative tricarboxylic transport membrane protein; Pfam:pfam07331 Tripartite tricarboxylate transporter TctB family.
 
  
 0.646
AMS40125.1
UbiD family decarboxylase; Pfam:pfam01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Belongs to the UbiD family.
       0.588
AMS40124.1
Pfam:pfam00171 Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
  
    0.583
AMS40127.1
Hypothetical protein; Pfam:pfam00866 Ring hydroxylating beta subunit.
       0.537
AMS40128.1
Hydrogenase; Pfam:pfam00355 Rieske [2Fe-2S] domain.
       0.528
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.