Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS40127.1Hypothetical protein; Pfam:pfam00866 Ring hydroxylating beta subunit. (182 aa)    
Predicted Functional Partners:
AMS40128.1
Hydrogenase; Pfam:pfam00355 Rieske [2Fe-2S] domain.
 
 
 0.993
AMS40107.1
Hydrogenase; Pfam:pfam00355 Rieske [2Fe-2S] domain.
 
 
 0.970
AMS40610.1
Oxidoreductase; Pfam:pfam00111 2Fe-2S iron-sulfur cluster binding domain.
 
 
 0.909
AMS43009.1
Hypothetical protein; Pfam:pfam00355 Rieske [2Fe-2S] domain.
 
 
 0.818
AMS40131.1
Pfam:pfam00111 2Fe-2S iron-sulfur cluster binding domain.
 
  
 0.812
AMS39128.1
Rieske (2Fe-2S) protein; Pfam:pfam00848 Ring hydroxylating alpha subunit (catalytic domain).
  
 
 0.751
AMS40608.1
Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenase, large terminal subunit.
  
 
 0.751
AMS40609.1
(2Fe-2S)-binding protein.
  
 
 0.751
AMS40132.1
Pyridine nucleotide-disulfide oxidoreductase domain protein; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase.
 
   
 0.732
AMS40129.1
Pfam:pfam07729 FCD domain.
  
  
 0.716
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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