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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40142.1OmpA/MotB domain protein; Pfam:pfam00691 OmpA family. (302 aa)    
Predicted Functional Partners:
AMS40141.1
Hypothetical protein; Pfam:pfam15611 EH_Signature domain.
 
     0.954
AMS40143.1
Hypothetical protein.
 
  
 0.945
AMS40140.1
Hypothetical protein; Pfam:pfam00176 SNF2 family N-terminal domain.
 
     0.909
motA
Flagellar motor protein MotA.
  
 
 0.904
AMS41011.1
Hypothetical protein; Pfam:pfam06429 Flagellar basal body rod FlgEFG protein C-terminal.
  
  
 0.699
AMS41033.1
Pfam:pfam06429 Flagellar basal body rod FlgEFG protein C-terminal; Belongs to the flagella basal body rod proteins family.
  
  
 0.685
AMS41034.1
Hypothetical protein.
  
  
 0.645
AMS41007.1
Pfam:pfam03963 Flagellar hook capping protein - N-terminal region.
  
  
 0.609
AMS41036.1
Pfam:pfam00006 ATP synthase alpha/beta family, nucleotide-binding domain.
  
  
 0.598
AMS41019.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
  
 0.592
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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