Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS40191.1Pfam:pfam07940 Heparinase II/III-like protein. (573 aa)    
Predicted Functional Partners:
AMS40192.1
MFS transporter; Pfam:pfam01189 NOL1/NOP2/sun family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
 
    0.737
AMS40194.1
Pfam:pfam07896 Protein of unknown function (DUF1674).
 
     0.698
AMS39975.1
Pfam:pfam07219 HemY protein N-terminus.
  
     0.684
AMS39187.1
Hypothetical protein; Pfam:pfam06835 Lipopolysaccharide-assembly, LptC-related.
  
     0.648
AMS40206.1
Hypothetical protein; Pfam:pfam04390 Lipopolysaccharide-assembly.
  
     0.646
AMS39705.1
Histidine kinase; Pfam:pfam13756 Stimulus-sensing domain.
  
     0.644
AMS39697.1
LuxR family transcriptional regulator; Pfam:pfam12705 PD-(D/E)XK nuclease superfamily.
  
     0.638
AMS39749.1
Hypothetical protein; Pfam:pfam06144 DNA polymerase III, delta subunit.
  
     0.618
lptD
Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.598
htpX
Peptidase; Pfam:pfam01435 Peptidase family M48; Belongs to the peptidase M48B family.
       0.587
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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