Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS40225.1Hypothetical protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (294 aa)    
Predicted Functional Partners:
AMS40223.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
 0.999
AMS40224.1
Hypothetical protein; Pfam:pfam01370 NAD dependent epimerase/dehydratase family; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.999
AMS39488.1
Pfam:pfam00908 dTDP-4-dehydrorhamnose 3,5-epimerase.
 
 
 0.996
AMS40222.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
 0.996
AMS40226.1
Pfam:pfam00535 Glycosyl transferase family 2.
 
  
 0.893
AMS42948.1
UDP-phosphate glucose phosphotransferase; Pfam:pfam02397 Bacterial sugar transferase.
 
  
 0.891
rfbB_2
Pfam:pfam01370 NAD dependent epimerase/dehydratase family.
  
 0.868
AMS39698.1
Mannose-1-phosphate guanylyltransferase; Pfam:pfam12804 MobA-like NTP transferase domain.
  
  
 0.707
AMS44209.1
2-deoxycytidine 5-triphosphate deaminase; Pfam:pfam06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD).
   
    0.636
AMS40227.1
Pfam:pfam14307 Glycosyltransferase WbsX.
 
  
 0.617
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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