Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS40244.1Pfam:pfam03572 Peptidase family S41; Belongs to the peptidase S41A family. (442 aa)    
Predicted Functional Partners:
AMS40243.1
Membrane protein; Pfam:pfam01551 Peptidase family M23.
 
  
 0.948
AMS43787.1
Tetratricopeptide TPR_1 repeat-containing protein; Pfam:pfam13414 TPR repeat.
 
 
 0.853
rppH
RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.
 
   
 0.802
AMS40245.1
Hypothetical protein; Pfam:pfam04748 Divergent polysaccharide deacetylase.
       0.704
AMS44391.1
Hypothetical protein; Pfam:pfam00877 NlpC/P60 family.
    
 
 0.696
AMS39956.1
Hypothetical protein; Pfam:pfam03567 Sulfotransferase family.
  
 
 0.670
AMS39705.1
Histidine kinase; Pfam:pfam13756 Stimulus-sensing domain.
 
   
 0.522
AMS42736.1
Zinc metalloprotease; Pfam:pfam02163 Peptidase family M50.
 
  
 0.511
gpmA
Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
  
  
 0.486
mtgA
Peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
 
   
 0.478
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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