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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40267.1Membrane protein. (115 aa)    
Predicted Functional Partners:
AMS40264.1
Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
     0.869
AMS40265.1
Branched-chain amino acid ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
     0.864
AMS40263.1
Leucine/isoleucine/valine transporter subunit membrane component of ABC superfamily; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
     0.825
AMS40266.1
Pfam:pfam00005 ABC transporter.
 
     0.815
AMS40268.1
Amino acid ABC transporter substrate-binding protein; Pfam:pfam13458 Periplasmic binding protein.
 
     0.804
AMS43695.1
Leucine transporter subunit periplasmic-binding component of ABC superfamily; Pfam:pfam13458 Periplasmic binding protein.
 
     0.644
AMS42080.1
Extracellular ligand-binding receptor; Pfam:pfam13458 Periplasmic binding protein.
 
     0.607
AMS41783.1
Pfam:pfam09838 Uncharacterized protein conserved in bacteria (DUF2065).
  
     0.519
AMS41869.1
Pfam:pfam07330 Protein of unknown function (DUF1467).
  
     0.507
AMS41504.1
Hypothetical protein; Pfam:pfam06059 Domain of Unknown Function (DUF930).
  
     0.499
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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