Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS40272.1LysR family transcriptional regulator; Pfam:pfam03466 LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family. (297 aa)    
Predicted Functional Partners:
AMS40273.1
Hypothetical protein; Pfam:pfam13460 NADH(P)-binding.
 
     0.837
AMS43866.1
Putative LysR, transcriptional regulator; Pfam:pfam03466 LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
  
     0.743
AMS40391.1
Hypothetical protein; Pfam:pfam03466 LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
  
     0.737
AMS43107.1
Pfam:pfam00126 Bacterial regulatory helix-turn-helix protein, lysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.737
AMS43877.1
LysR family transcriptional regulator; Pfam:pfam03466 LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
  
     0.731
AMS39382.1
Hypothetical protein; Pfam:pfam03466 LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
  
     0.730
AMS41533.1
LysR family transcriptional regulator; Pfam:pfam03466 LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
  
     0.725
AMS43098.1
LysR family transcriptional regulator; Pfam:pfam03466 LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
  
     0.725
AMS41405.1
Hypothetical protein; Pfam:pfam00126 Bacterial regulatory helix-turn-helix protein, lysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.723
AMS40007.1
Transcriptional regulator, LysR family; Pfam:pfam03466 LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
  
     0.714
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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